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Dernière mise à jour : Mai 2018

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Published Work


-Grandmontagne D.,Navarro D.,Neugnot-Roux V.,Ladevèze S.,Berrin JG The Secretomes of Aspergillus japonicus and Aspergillus terreus Supplement the Rovabio Enzyme Cocktail for the Degradation of Soybean Meal for Animal Feed Journal of Fungi DOI: 10.3390/jof7040278

-Hayat Hage, Marie-Noëlle Rosso, Lionel Tarrago Distribution of methionine sulfoxide reductases in fungi and conservation of the free-methionine-R-sulfoxide reductase in multicellular eukaryotes. Free Radical Biology and Medicine DOI: 10.1016/j.freeradbiomed.2021.04.013

-Ribeaucourt, David,Bissaro, Bastien,Guallar, Victor,Yemloul, Mehdi,Haon, Mireille,Grisel, Sacha,Alphand, Véronique,Brumer, Harry,Lambert, Fanny,Berrin, Jean-Guy,Lafond, Mickael Comprehensive Insights into the Production of Long Chain Aliphatic Aldehydes Using a Copper-Radical Alcohol Oxidase as Biocatalyst ACS Sustainable Chem. Eng. DOI: 10.1021/acssuschemeng.0c07406

-Hage, H.; Rosso, M.-N. Evolution of Fungal Carbohydrate-Active Enzyme Portfolios and Adaptation to Plant Cell-Wall Polymers. J. Fungi DOI: 10.3390/jof7030185

-Hage, H., Miyauchi, S., Virágh, M., Drula, E., Min, B., Chaduli, D., Navarro, D., Favel, A., Norest, M., Lesage-Meessen, L., , … Rosso, M. N. (2021). Gene family expansions and transcriptome signatures uncover fungal adaptations to wood decay. Environmental microbiology DOI: 10.1111/1462-2920.15423

-Choi DW,Roh YJ,..., Tarrago L, Danial NN.,Gladyshev VN.,Min PK,Lee BCh Development of a novel fluorescent biosensor for dynamic monitoring of metabolic methionine redox status in cells and tissues. Biosensors and Bioelectronics DOI: 10.1016/j.bios.2021.113031

-Daou, M.; Farfan Soto, C.; Majira, A.; Cézard, L.; Cottyn, B.; Pion, F.; Navarro, D.; Oliveira Correia, L.; Drula, E.; Record, E.; Raouche, S.; Baumberger, S.; Faulds, C.B. Fungal Treatment for the Valorization of Technical Soda Lignin. J. Fungi 2021, 7, 39.DOI: 10.3390/jof7010039


-Anikó Várnai, Olav A. Hegnar, Svein J. Horn, Vincent G.H. Eijsink, Jean-Guy Berrin Fungal Lytic Polysaccharide Monooxygenases (LPMOs): Biological Importance and Applications,Reference Module in Life Sciences,Elsevier DOI: 10.1016/B978-0-12-819990-9.00019-6

-Luis Alberto Zevallos Torres, ..., Craig Faulds, Pedro Coutinho, Emmanuel Bertrand, Carlos Ricardo Soccol, Lignin from oil palm empty fruit bunches: Characterization, biological activities and application in green synthesis of silver nanoparticles International Journal of Biological Macromolecules DOI: 10.1016/j.ijbiomac.2020.11.104

-Penha RO.,Vandenberghe LPS.,Faulds C,Soccol VT.,Soccol CR. Bacillus lipopeptides as powerful pest control agents for a more sustainable and healthy agriculture: recent studies and innovations Planta DOI: 10.1007/s00425-020-03357-7

-Frandsen KEH, Haon M, Grisel S, Henrissat B, Lo Leggio L, Berrin JG. Identification of the molecular determinants driving the substrate specificity of fungal lytic polysaccharide monooxygenases (LPMOs). J Biol Chem. 2020 Nov 16:jbc.RA120.015545. DOI: 10.1074/jbc.RA120.015545

-Ruiz-Dueñas FJ, Barrasa JM, Sánchez-García M, Camarero S, Miyauchi S, Serrano A, Linde D, Babiker R, Drula E, Ayuso-Fernández I, Pacheco R, Padilla G, Ferreira P, Barriuso J, Kellner H, Castanera R, Alfaro M, Ramirez L, Pisabarro AG, Riley R, Kuo A, Andreopoulos W, LaButti K, Pangilinan J, Tritt A, Lipzen A, He G, Yan M, Ng V, Grigoriev IV, Cullen D, Martin F, Rosso MN, Henrissat B, Hibbett D, Martínez AT. Genomic Analysis Enlightens Agaricales Lifestyle Evolution and Increasing Peroxidase Diversity. Mol Biol Evol. 2020 Nov 19:msaa301. DOI: 10.1093/molbev/msaa301.

-Torres LAZ ,Wociciechowski AL ,de Andrade Tanobe VO ,Filho AZ ,de Freitas RA ,Noseda MD ,Szameitat ES ,Faulds C ,Coutinho P ,Bertrand E ,Soccol CR Lignin from oil palm empty fruit bunches: Characterization, biological activities and application in green synthesis of silver nanoparticles. International Journal of Biological Macromolecules DOI: 10.1016/j.ijbiomac.2020.11.104

-Kont R.,Bissaro B.,Eijsink VGH,Väljamäe P. Kinetic insights into the peroxygenase activity of cellulose-active lytic polysaccharide monooxygenases (LPMOs). Nature Communications DOI: 10.1038/s41467-020-19561-8

-Ali, W.B.; Ayed, A.B.; Turbé-Doan, A.; Bertrand, E.; Mathieu, Y.; Faulds, C.B.; Lomascolo, A.; Sciara, G.; Record, E.; Mechichi, T. Enzyme Properties of a Laccase Obtained from the Transcriptome of the Marine-Derived Fungus Stemphylium lucomagnoense.Int. J. Mol. Sci.DOI: 10.3390/ijms21218402

-Del Corpo D.,Fullone MR.,Miele R.,Lafond M.,Pontiggia D.,Grisel S.,Kieffer-Jaquinod S.,Giardina T.,Bellincampi D.,Lionetti V. AtPME17 is a functional Arabidopsis thaliana pectin methylesterase regulated by its PRO region that triggers PME activity in the resistance to Botrytis cinerea Molecular Plant Pathology DOI: 10.1111/mpp.13002

-Ben Ali, W.; Navarro, D.; Kumar, A.; Drula, E.; Turbé-Doan, A.; Correia, L.O.; Baumberger, S.; Bertrand, E.; Faulds, C.B.; Henrissat, B.; Sciara, G.; Mechichi, T.; Record, E. Characterization of the CAZy Repertoire from the Marine-Derived Fungus Stemphylium lucomagnoense in Relation to Saline Conditions. Mar. Drugs DOI: 10.3390/md18090461

-Zerva A., Pentari C.,Grisel S.,Berrin JG, Topakas E. A new synergistic relationship between xylan-active LPMO and xylobiohydrolase to tackle recalcitrant xylan Biotechnology for Biofuels DOI: 10.1186/s13068-020-01777-x

-Grieco Maria Angela B., Haon Mireille, Grisel Sacha, de Oliveira-Carvalho Ana Lucia, Magalhães Augusto Vieira, Zingali Russolina B., Pereira Nei, Berrin Jean-Guy. Evaluation of the Enzymatic Arsenal Secreted by Myceliophthora thermophila During Growth on Sugarcane Bagasse With a Focus on LPMOs Frontiers in Bioengineering and Biotechnology. DOI: 10.3389/fbioe.2020.01028

-Tarrago L, Grosse S, Lemaire D, et al. Reduction of Protein Bound Methionine Sulfoxide by a Periplasmic Dimethyl Sulfoxide Reductase. Antioxidants (Basel). DOI: 10.3390/antiox9070616

-Rosso MN, Berrin JG, Papon N Less Wastage in a Bottle Trends in Chemistry DOI:

-Miyauchi S, Hage H, Drula E, Lesage-Meessen L, Berrin JG, Navarro D, Favel A, Chaduli D, Grisel S, Haon M, Piumi F, Levasseur A, Lomascolo A, Ahrendt S, Barry K, LaButti KM, Chevret D, Daum C, Mariette J, Klopp C, Cullen D, de Vries RP, Gathman AC, Hainaut M, Henrissat B, Hildén KS, Kües U, Lilly W, Lipzen A, Mäkelä MR, Martinez AT, Morel-Rouhier M, Morin E, Pangilinan J, Ram AFJ, Wösten HAB, Ruiz-Dueñas FJ, Riley R, Record E, Grigoriev IV, Rosso MN. Conserved white rot enzymatic mechanism for wood decay in the Basidiomycota genus Pycnoporus.DNA Res. DOI:

-Penha, RO, Vandenberghe, LPS, Faulds, C, Soccol, VT., Soccol, CR. Bacillus lipopeptides as powerful pest control agents for a more sustainable and healthy agriculture: recent studies and innovations Planta DOI:

-Zevallos Torres, L.A., Lorenci Woiciechowski, A., de Andrade Tanobe, V.O., Karp, S.G., Guimarães Lorenci, L.C., Faulds, C., Soccol, C.R. Lignin as a potential source of high-added value compounds: A review Journal of Cleaner Production DOI:

-Ben Ali, W,Chaduli, D,Navarro, D,Lechat, C,Turbé-Doan, A,Bertrand, E,Faulds, CB.,Sciara, G,Lesage-Meessen, L,Record, E,Mechichi, T Screening of five marine-derived fungal strains for their potential to produce oxidases with laccase activities suitable for biotechnological applications BMC Biotechnology DOI:

-Bissaro, B.,Kommedal, E,Rohr, A,Eijsink, V Controlled depolymerization of cellulose by light-driven lytic polysaccharide oxygenases. Nature Communications DOI:

-Bourlieu, C,Astruc, T,Barbe, S,Berrin, JG,Bonnin, E,Boutrou, R,Hugouvieux, V,Le Feunteun, S,Paës, G Enzymes to unravel bioproducts architecture. Biotechnology Advances DOI:

- McGregor, N, Artola, M, Nin-Hill, A, Linzel, D, Haon, M, Reijngoud, J, Ram, A, Rosso, MN, van der Marel, G,Codée, J, van Wezel, G, Berrin, JG,Rovira, C,Overkleeft, H, Davies, G
Rational Design of Mechanism-Based Inhibitors and Activity-Based Probes for the Identification of Retaining α-l-Arabinofuranosidases. J. Am. Chem. Soc. DOI: "

-Labourel A, Frandsen KEH, Zhang F, Brouilly N, Grisel S, Haon M, Ciano L, Ropartz D, Fanuel M, Martin F, Navarro D, Rosso MN, Tandrup T, Bissaro B, Johansen KS, Zerva A, Walton PH, Henrissat B, Leggio LL, Berrin JG.
A fungal family of lytic polysaccharide monooxygenase-like copper proteins. Nat Chem Biol. DOI: 10.1038/s41589-019-0438-8

-Meyer, Vera,Basenko, Evelina Y.,Benz,[...],Record, Eric,Ross, Phil,Shapaval, [...],Yarden, Oded,Wösten, Han A. B. Growing a circular economy with fungal biotechnology: a white paperFungal Biology and Biotechnology DOI:


-Hyde, KD.,Xu, J.,...,Faulds, C.,...,Stadler, M. The amazing potential of fungi: 50 ways we can exploit fungi industrially. Fungal Diversity DOI: 10.1007/s13225-019-00430-9

-Bertrand, E. Chapter 13 « Food Processing, Cooking, and Aging: A Practical Case Study ». In Food Aroma Evolution, par Matteo Bordiga et Leo M.L. Nollet, 261‑79. édité par Matteo Bordiga et Leo M.L. Nollet, 1ʳᵉ éd. 1st edition. | Boca Raton : CRC Press, 2019. | Series: Food analysis & properties, 2475-7551: CRC Press, 2019. DOI: https://doi/10.1201/9780429441837-13

-Turbe-Doan A, Record E, Lombard V, Kumar R, Levasseur A, Henrissat B, Garron ML. The functional and structural characterization of Trichoderma reesei dehydrogenase belonging to the PQQ dependent family of Carbohydrate-Active Enzymes Family AA12. Applied and Environmental Microbiology. DOI: https://doi/10.1128/AEM.00964-19

-Molina, D., de Carvalho, J.C., Júnior, A.I.M, Bertrand E., Soccol C.R.Biological contamination and its chemical control in microalgal mass cultures. Applied Microbiology and Biotechnology. DOI: https://doi/10.1007/s00253-019-10193-7

-Chalak A, Villares A, Moreau C, Haon M, Grisel S, d'Orlando A, Herpoël-Gimbert I, Labourel A, Cathala B, Berrin JG.Influence of the carbohydrate-binding module on the activity of a fungal AA9 lytic polysaccharide monooxygenase on cellulosic substrates. Biotechnol Biofuels. DOI: https://doi/10.1186/s13068-019-1548-y

-Frandsen KEH, Tovborg M, Jørgensen CI, Spodsberg N, Rosso MN, ..., Berrin JG, Lo Leggio L.Insights into an unusual Auxiliary Activity 9 family member lacking the histidine brace motif of lytic polysaccharide monooxygenases. J Biol Chem. DOI: https://doi/10.1074/jbc.RA119.009223

-Moreau C, Tapin-Lingua S, Grisel S, Gimbert I, Le Gall S, Meyer V, Petit-Conil M, Berrin JG, Cathala B, Villares A. Lytic polysaccharide monooxygenases (LPMOs) facilitate cellulose nanofibrils production. Biotechnol Biofuels. DOI: https://doi/10.1186/s13068-019-1501-0

-Schröder, S. P., de Boer, C., McGregor, N. G., Rowland, R. J., Moroz, O., Blagova, E., ...JG Berrin,... & Davies JD, Overkleeft H. (2019). Dynamic and Functional Profiling of Xylan-Degrading Enzymes in Aspergillus Secretomes Using Activity-Based Probes. ACS Central Science. DOI: https://doi/10.1021/acscentsci.9b00221

- Wikee S, Hatton J, Turbé-Doan A, Mathieu Y, Daou M, Lomascolo A, Kumar A, Lumyong S, Sciara G, Faulds CB, Record E. Characterization and Dye Decolorization Potential of Two Laccases from the Marine-Derived Fungus Pestalotiopsis sp.Int J Mol Sci.. DOI:

- Paës G, Navarro D, Benoit Y, Blanquet S, Chabbert B, Chaussepied B, Coutinho PM, Durand S, Grigoriev IV, Haon M, Heux L, Launay C, Margeot A, Nishiyama Y, Raouche S, Rosso MN, Bonnin E, Berrin JG. Tracking of enzymatic biomass deconstruction by fungal secretomes highlights markers of lignocellulose recalcitrance. Biotechnol Biofuels.. DOI:

- Tauzin, A.S., Bruel, L., Laville, E., Nicoletti, C., Navarro, D., Henrissat, B., Perrier, J., Potocki-Veronese, G., Giardina, T., Lafond, M., 2019. Sucrose 6F-phosphate phosphorylase: a novel insight in the humangut microbiome. Microb Genom. DOI:

-Anasontzis GE, Lebrun MH, Haon M, Champion C, Kohler A, Lenfant N, Martin F, O'Connell RJ, Riley R, Grigoriev IV, Henrissat B, Berrin JG, Rosso MN. Broad-specificity GH131 β-glucanases are a hallmark of Fungi and Oomycetes that colonise plants. Environ Microbiol. DOI:

-Filiatrault-Chastel C, Navarro D , Haon M , Grisel S, Herpoël-Gimbert I, Chevret D, Fanuel M, Henrissat B, Heiss-Blanquet S , Margeot A, Berrin JG. AA16, a new lytic polysaccharide monooxygenase family identified in fungal secretomes Biotech for Biofuels. DOI:

-Guirimand G, Inokuma K, Bamba T, Matsuda M, Morita K, Sasaki K, Ogino C, Berrin JG, Hasunuma T, Kondo A. Cell-surface display technology and metabolic engineering of Saccharomyces cerevisiae for enhancing xylitol production from woody biomass Green Chemistry. DOI:

-Oliveira DM, Mota TR, Oliva B, Segato F, Marchiosi R,Ferrarese-Filho O, Faulds CB, Dos Santos WD. Feruloyl esterases: Biocatalysts to overcome biomass recalcitrance and for the production of bioactive compounds. Bioresour Technol. DOI:

-Daou M, Yassine B, Wikee S, Record E, Duprat F, Bertrand E, Faulds CB. Pycnoporus cinnabarinus glyoxal oxidases display differential catalytic efficiencies on 5-hydroxymethylfurfural and its oxidized derivatives. Fungal Biol Biotechnol. DOI:

-Guedes DC, Pasquali AKS, Minozzo JC, Faulds C, Petterle RR, Soccol CR, Soccol VT. Biological evaluation of mimetic peptides as active molecules for a new and simple skin test in an animal model. Parasitology Res. DOI:


- Bertrand E., Rosso M-N.Biodiversité fongique et Développement Durable, enjeux et opportunités. Revue Francophone du Développement Durable LINK : hors-série, n°6, Décembre, p. 1 – 13

- Rouches E, Zhou S, Sergent M, S. Raouche S, H. Carrere H.Influence of white-rot fungus Polyporus brumalis BRFM 985 culture conditions on the pretreatment efficiency for anaerobic digestion of wheat straw
Biomass and BioenergyDOI:

- Jaouannet M, Nguyen CN, Quentin M, Jaubert-Possamai S, Rosso MN and Favery N.In situ Hybridization (ISH) in preparasitic and parasitic stages of the plant-parasitic nematodes Meloidogyne spp.
Bio-protocol.DOI: 10.21769/BioProtoc.2766

-Tandrup T, Frandsen KEH, Johansen KS, Berrin JG, Lo Leggio L.Recent insights into lytic polysaccharide monooxygenases (LPMOs).Biochem Soc Trans.DOI:

-Lesage-Meessen L, Bou M, Ginies C, Chevret D, Navarro D, Drula E, Bonnin E, Del Río JC, Odinot E, Bisotto A,
Berrin JG, Sigoillot JC, Faulds CB, Lomascolo A.Lavender- and lavandin-distilled straws: an untapped feedstock with great potential for the production of high-added
value compounds and fungal enzymes. Biotechnol Biofuels. DOI:

-Jurak E, Suzuki H, van Erven G, Gandier JA, Wong P, Chan K, Ho CY, Gong Y, Tillier E, Rosso MN,
Kabel MA, Miyauchi S, Master ER.Dynamics of the Phanerochaete carnosa transcriptome during growth on aspen and spruce. BMC Genomics DOI:

-Montalvo GEB, Thomaz-Soccol V, Vandenberghe LPS, Carvalho JC, Faulds CB, Bertrand E, Prado MRM, Bonatto SJR,
Soccol CR. Arthrospira maxima OF15 biomass cultivation at laboratory and pilot scale from sugarcane vinasse for
potential biological new peptides production. Bioresour Technol. DOI:

- Camara, M.C., Vandenberghe, L.P.S., Rodrigues, C., de Oliveira, J., Faulds, C., Bertrand, E., Soccol, C.R. Current advances in gibberellic acid (GA3) production, patented technologies and potential applications. Planta. DOI:

- Zhang F, Anasontzis GE, Labourel A, Champion C, Haon M, Kemppainen M, Commun C, Deveau A, Pardo A, Veneault-Fourrey C, Kohler A, Rosso MN, Henrissat B, Berrin JG, Martin F. The ectomycorrhizal basidiomycete Laccaria bicolor releases a secreted β-1,4 endoglucanase that plays a key role in symbiosis development. New Phytol. DOI:

-Maurício da Fonseca MJ, Jurak E, Kataja K, Master ER, Berrin JG, Stals I, Desmet T, Van Landschoot A, Briers Y. Analysis of the substrate specificity of α-L-arabinofuranosidases by DNA sequencer-aided fluorophore-assisted
carbohydrate electrophoresis. Appl Microbiol Biotechnol. DOI:

- Bertrand, E., El Boustany, P., Faulds, C.B., Berdagué, J.-L. The Maillard Reaction in Food: An Introduction, in: Reference Module in Food Science. Elsevier. DOI: 10.1016/B978-0-08-100596-5.21459-5

- Bertrand, E., Pasquier, C., Duchez, D., Girard, S., Pons, A., Bonnet, P., Creuly, C., Dussap, C.-G High-frequency, high-intensity electromagnetic field effects on Saccharomyces cerevisiae conversion yields and growth rates in a reverberant environment. Bioresource Technology DOI: 10.1016/j.biortech.2018.03.130

- Kumar A, Sørensen JL, Hansen FT, Arvas M, Syed MF, Hassan L, Benz JP, Record E, Henrissat B, Pöggeler S, Kempken F. Genome Sequencing and analyses of Two Marine Fungi from the North Sea Unraveled a Plethora of Novel Biosynthetic Gene Clusters. Sci Rep. DOI: 10.1038/s41598-018-28473-z

- Schoville SD, ..., Record É, Rinehart JP, Robertson HM, Rosendale AJ, Ruiz-Arroyo VM, Smagghe G, Szendrei Z, Thomas GWC, Torson AS, Vargas Jentzsch IM, Weirauch MT, Yates AD, Yocum GD, Yoon JS, Richards S. A model species for agricultural pest genomics: the genome of the Colorado potato beetle, Leptinotarsa decemlineata (Coleoptera: Chrysomelidae). Sci Reports DOI: 10.1038/s41598-018-20154-1

- Amara S, Perrot T, Navaro D, Deroy A, Benkhelfallah A, Chalak A, Daou M, Chevret D, Faulds CB, Berrin J-G, Morel-Rouhier M, Gelhaye E and Record E. Enzyme activities of two recombinant heme-including peroxidases TvDyP1 and TvVP2 identified from the secretome of Trametes versicolor. Appl Environ Microbio DOI: 10.1128/AEM.02826-17

- Couturier M, Ladevèze S, Sulzenbacher G, Ciano L, Fanuel M, Moreau C, Villares A, Cathala B, Chaspoul F, Frandsen KE, Labourel A, Herpoël-Gimbert I, Grisel S, Haon M, Lenfant N, Rogniaux H, Ropartz D, Davies GJ, Rosso MN, Walton PH, Henrissat B, Berrin JG. Lytic xylan oxidases from wood-decay fungi unlock biomass degradation. Nat Chem Biol.DOI: 10.1038/nchembio.2558.

- CAZypedia Consortium (incl. Berrin JG) Ten years of CAZypedia: A living encyclopedia of carbohydrate-active enzymes. Glycobiology. DOI: 10.1093/glycob/cwx089.

- Marquez-Escalante JA, Carvajal-Millan E, Yadav MP, Kale M, Rascon-Chu A, Gardea AA, Valenzuela-Soto EM, Lopez-Franco YL, Lizardi-Mendoza J, Faulds CB. Rheology and microstructure of gels based on wheat arabinoxylans enzymatically modified in arabinose to xylose ratio. Journal of the Science of Food and Agriculture, DOI 10.1002/jsfa.8537


-Guedes DC, Minozzo JC, Pasquali AKS, Faulds C, Soccol CR, Thomaz-Soccol V. New strategy to improve the quality control at production process of Montenegro antigen for skin test.
Rev Soc Bras Med Trop., DOI 10.1590/0037-8682-0131-2017

- Chabbert B1, Habrant A, Herbaut M, Foulon L, Aguié-Béghin V, Garajova S, Grisel S, Bennati-Granier C, Gimbert-Herpoël I, Jamme F, Réfrégiers M, Sandt C, Berrin JG, Paës G. Action of lytic polysaccharide monooxygenase on plant tissue is governed by cellular type. Sci Rep. 2017 Dec 19;7(1):17792. doi: : 10.1038/s41598-017-17938-2
- Bertrand, E., Berrin, J.-G., Boyer, C., Daou, M., Delattre, M., Drula, E., Favel, A., Grisel, S., Haon, M., Herpoel-Gimbert, I., Lesage-Meessen, L., Lomascolo, A., Navarro, D., Raouche, S., Record, E., Rosso, M.-N., Sigoillot, J.-C., Taussac, S., Turbe-Doan, A., Faulds, C.B., 2017. Exploration of fungal biodiversity for the deconstruction of lignocellulosic biomass and the implementation of new biosynthetic pathways for green chemistry, in: Diemer, A., Diericks, F., Gladkykh, G., Morales, M.E., Parrique, T., Torres, J. (Eds.), European Union and Sustainable Development - Challenges and Prospects. Arnaud Diemer, Clermont-Ferrand, France, pp. 120–139.

- Odinot, E., Fine, F., Sigoillot, J.-C., Navarro, D., Laguna, O., Bisotto, A., Peyronnet, C., Ginies, C., Lecomte, J., Faulds, C., Lomascolo, A. (2017). A Two-Step Bioconversion Process for Canolol Production from Rapeseed Meal Combining an Aspergillus niger Feruloyl Esterase and the Fungus Neolentinus lepideus. Microorganisms, 5 (67), 17 p. DOI : 10.3390/microorganisms5040067,

- Zhou S, Herpoël-Gimbert I, Grisel S, Sigoillot J-C, Sergent M, Raouche S. Biological wheat straw valorization : Multicriteria optimization of Polyporus brumalis pretreatment, in packed bed bioreactor. MicrobiologyOpen, e00530. DOI : 10.1002/mbo3.530

- Ladeveze S, Haon M, Villares A, Cathala B, Henrissat B, Berrin J-G. The yeast Geotrichum candidum encodes functional lytic polysaccharide monooxygenases. Biotech for Biofuels, 10. DOI : 10.1186/s13068-017-0903-0,

- Wilkens C, Andersen S, Dumon C, Berrin JG, Svensson B (2017) GH62 arabinofuranosidases: Structure, function and applications. Biotechnology Advances. 35(6), 792-804 doi: 10.1016/j.biotechadv.2017.06.005 (in press)

- Berrin JG, Rosso MN, Abou Hachem M. (2017) Fungal secretomics to probe the biological functions of lytic polysaccharide monooxygenases. Carbohydr Res. 448, 155-160 doi: 10.1016/j.carres.2017.05.010. (in press)

- Zhou S, Raouche S, Grisel S, Sigoillot JC, Herpoël-Gimbert I. (2017) Efficient biomass pretreatment using the White-rot Fungus Polyporus brumalis. Fungal Genomics & Biology. 2017, 7 (1), 1-6 doi: 10.4172/2165-8056.1000150

- Martínez AT, Ruiz-Dueñas FJ, Camarero S, Serrano A, Linde D, Lund H, Vind J, Tovborg M, Herold-Majumdar OM, Hofrichter M, Liers C, Ullrich R, Scheibner K, Sannia G, Piscitelli A, Pezzella C, Sener ME, Kılıç S, van Berkel WJH, Guallar V, Lucas MF, Zuhse R, Ludwig R, Hollmann F, Fernández-Fueyo E, Record E, Faulds CB, Tortajada M, Winckelmann I, Rasmussen JA, Gelo-Pujic M, Gutiérrez A, Del Río JC, Rencoret J, Alcalde M. (2017) Oxidoreductases on their way to industrial biotransformations. Biotechnology Advances doi: 10.1016/j.biotechadv.2017.06.003 (in press)

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- Ma S., Preims M., Piumi F., Kappel L., Seidl-Seiboth V., Record E., Kracher D., Ludwig R. (2017) Molecular and catalytic properties of fungal extracellular cellobiose dehydrogenase produced in prokaryotic and eukaryotic expression systems. Microb Cell Fact 16:37. doi: 10.1186/s12934-017-0653-5. PMID: 28245812

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- Villares A, Moreau C, Bennati-Granier C, Garajova S, Foucat L, Falourd X, Saake B, Berrin JG, Cathala B (2017) Lytic polysaccharide monooxygenases disrupt the cellulose fibers structure. Scientific Reports. 7: 40262. doi:10.1038/srep40262

- Van Wyk N, Navarro D, Blaise M, Berrin JG, Henrissat B, Drancourt M, Kremer L. (2017) Characterization of a mycobacterial cellulase and its impact on biofilm- and drug-induced cellulose production. Glycobiology.


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- Ali-Ahmad A, Garron ML, Zamboni V, Lenfant N, Nurizzo D, Henrissat B, Berrin JG, Bourne Y, Vincent F. (2016) Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. J. Struct. Biol. S1047-8477(16)30245-3. doi: 10.1016/j.jsb.2016.11.004.

- Tangthirasunun N., Navarro D., Garajova S., Chevret D., Chan Ho Tong L., Gautier V., Hyde K., Silar P., Berrin J-G. (2016) Inactivation of Cellobiose Dehydrogenases Modifies the Cellulose Degradation Mechanism of Podospora anserina. Appl Environ Microbiol. 83(2). pii: e02716-16. doi: 10.1128/AEM.02716-16.

- Schar A, Sprecher I, Topakas E, Faulds C, Nystrom L. (2016) Hydrolysis of nonpolar n-Alkyl ferulates by feruloyl estérases. Journal of Agricultural and Food Chemistry, American Chemical Society, 64 (45), pp.8549 - 8554. DOI:10.1021/acs.jafc.6b02694

-Kandalla PK, Sarrazin S, Molawi K, Berruyer C, Redelberger D, Favel A, Bordi C, de Bentzmann S, Sieweke MH (2016) M-CSF improves protection against bacterial and fungal infections after hematopoietic stem/progenitor cell transplantation. Journal of Experimental Medicine, 213 (11) : 2269 - 2279. DOI:10.1084/jem.20151975

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- Couturier M, Navarro D, Favel A, Haon M, Lechat C, Lesage-Meessen L, Chevret D, Lombard V, Henrissat B and Berrin JG (2016) Fungal secretomics of ascomycete fungi for biotechnological applications. Mycosphere. Doi 10.5943/mycosphere/si/3b/6

- Miyauchi S, Navarro D, Grigoriev IV, Lipzen A, Riley R, Chevret D, Grisel S, Berrin JG, Henrissat B and Rosso M (2016). Visual comparative omics of fungi for plant biomass deconstruction. Front. Microbiol.7:1335. doi: 10.3389/fmicb.2016.01335

- Rédou V, Kumar A, Hainaut M, Henrissat B, Record E, Barbier G, Burgaud G. (2016) Draft Genome Sequence of the Deep-Sea Ascomycetous Filamentous Fungus Cadophora malorum Mo12 from the Mid-Atlantic Ridge Reveals Its Biotechnological Potential. Genome Announc.4(4). pii: e00467-16. doi: 10.1128/genomeA.00467-16.

- Rédou V, Kumar A, Hainaut M, Henrissat B, Record E, Barbier G, Burgaud G. (2016) Draft Genome Sequence of the Deep-Sea Basidiomycetous Yeast Cryptococcus sp. Strain Mo29 Reveals Its Biotechnological Potential. Genome Announc.4(4). pii: e00461-16. doi: 10.1128/genomeA.00461-16.

- Daou M, Piumi F, Cullen D, Record E, Faulds CB. Heterologous Production and Characterization of Two Glyoxal Oxidases from Pycnoporus cinnabarinus. Appl Environ Microbiol.82(16):4867-75. doi: 10.1128/AEM.00304-16.

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- Garajova S, Mathieu Y, Beccia MR, Bennati-Granier C, Biaso F, Fanuel M, Ropartz D, Guigliarelli B, Record E, Rogniaux H, Henrissat B, Berrin J-G. (2016)Single-domain flavoenzymes trigger lytic polysaccharide monooxygenases for oxidative degradation of cellulose. Scientific reports 6: 28276.doi:10.1038/srep28276

- Couturier M, Tangthirasunun N, Ning X, Brun S, Gautier V, Bennati-Granier C, Silar P, Berrin JG. (2016) Plant biomass degrading ability of the coprophilic ascomycete fungus Podospora anserina. Biotechnology Advances. S0734-9750(16)30067-2. doi: 10.1016/j.biotechadv.2016.05.010.


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- Patel I., Ma S., Kracher D., Garajova S., Haon M., Faulds C.B., Berrin J.G., Ludwig R., Record E. (2016) New salt-responsive lytic polysaccharide monooxygenases from the mangrove fungus Pestalotiopsis sp. Nci6. Biotechnology for biofuels. 9:108. doi: 10.1186/s13068-016-0520-3.

- Lebrigand K., He L.D., Arguel M.J., Thakur N., Gouzy J., Henrissat B., Record E., Magdelenat G., Barbe V., Raffaele S., Barbry P., Ewbank J.J. (2016) Comparative genomic analysis of Drechmeria coniospora reveals core and specific genetic requirements for fungal endoparisitism of nematodes. PLoS Genetics. 12:e1006017. doi: 10.1371/journal.pgen.1006017.

- Mathieu Y., Piumi F., Valli R, Carro Aramburu J., Ferreira P., Faulds C.B., Record E. (2016) Secreted aryl alcohol quinone oxidoreductase from Pycnoporus cinnabarinus provides new activities and insights into fungal degradation of plant biomass. Applied and Environmental Microbiology. 82:2411-23. doi:10.1128/AEM.03761-15

- Gherbovet O., Fauré R., Ferreira F., Durand J., Ragon M., Hostyn G., Record E., Bozonnet S., O'Donohue M.J. (2016) Design of chromogenic probes for efficient screening and evaluation of feruloyl esterase-like activities. Journal of Molecular Catalysis B: Enzymatic. 126:24-31. doi:10.1016/j.molcatb.2016.01.012

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- Lafond M, Sulzenbacher G, Freyd T, Henrissat B, Berrin JG, Garron ML. The Quaternary Structure of a Glycoside Hydrolase Dictates Specificity towards beta-Glucans. (2016) Journal of Biological Chemistry. 291(13):7183-94. doi:10.1074/jbc.M115.695999

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- Couturier M, Mathieu Y, Li A, Navarro D, Drula E, Haon M, Grisel S, Ludwig R, Berrin JG. (2016) Characterization of a new aryl-alcohol oxidase secreted by the phytopathogenic fungus Ustilago maydis. Applied Microbiology and Biotechnology, 100(2):697-706. doi:10.1007/s00253-015-7021-3.

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- Bey M., Zhou S., Poidevin L., Henrissat B., Coutinho P.M., Berrin JG., Sigoillot JC. (2013) Cello-Oligosaccharide Oxidation Reveals Differences between Two Lytic Polysaccharide Monooxygenases (Family GH61) from Podospora anserina Applied and Environmental Microbiology, 79(2):488. A href="" target=_blank>PMID:23124232

- Bey M, Berrin JG, Sigoillot JC (2013) Compositions comprising cellobiose dehydrogenase from Pycnoporus cinnabarinus and their use for the degradation of lignocellulosic biomass. WO Patent 2,013,004,377 A href="" target=_blank customattributes="popupwidth|0attribute_separationpopupheight|0">access

P align=left>- Canam T., Dumonceaux T., Record E., Yebo L. (2013) White Rot Fungi: The key to sustainable biofuel production? Biofuels, 4 : 247-250.P align=left>- Couturier M., Roussel A., Rosengren A., Leone P., Stålbrand H., Berrin J-G. (2013) Structural and biochemical analyses of glycoside hydrolase families 5 and 26 beta-(1,4)-mannanases from Podospora anserina reveal differences upon manno-oligosaccharides catalysis. Journal of Biological Chemistry (in press) A href="" target=_blank customattributes="popupwidth|0attribute_separationpopupheight|0">PMID: 23558681P align=left>- Couturier M., Féliu J., Bozonnet S., Roussel A., Berrin J-G. (2013) Molecular engineering of fungal GH5 and GH26 beta-(1,4)-mannanases toward improvement of enzyme activity. PloS ONE 8(11):e79800 A href="" target=_blank customattributes="popupwidth|0attribute_separationpopupheight|0">accessP align=left>- Couturier M., Berrin J-G. (2013) The Saccharification Step: The Main Enzymatic Components. In Faraco V. (Ed) In: Lignocellulose Conversion, pp 93-110. Springer Berlin Heidelberg. A href="" target=_blank customattributes="popupwidth|0attribute_separationpopupheight|0">accessP align=left>- Driss D, Berrin J-G, Juge N, Bhiri F, Ghorbel R, Chaabouni SE (2013) Functional characterization of Penicillium occitanis Pol6 and Penicillium funiculosum GH11 xylanases. Protein Expression and Purification (in press) A href="" target=_blank customattributes="popupwidth|0attribute_separationpopupheight|0">PMID: 23791774

- Lechat C, Hairaud M, Lesage-Meessen L. (2013) Stachybotrys oleronensis. Fungal planet 208. Persoonia, 31:283.

- Lechat C, Lesage-Meessen L, Favel A (2013) A new species of Lanatonectria, L. hamatopilosa. Mycotaxon (in press).

- Levasseur A., Drula E., Lombard V., Coutinho P.M., Henrissat B. (2013) Expansion of the enzymatic repertoire of the CAZy database to integrate auxiliary redox enzymes. Biotechnology for Biofuels 6:41. A href="" target=_blank customattributes="popupwidth|0attribute_separationpopupheight|0">PMID: 23514094

- Niemi, P., Martins, D., Buchert, J., Faulds, C.B.(2013) Pre-hydrolysis with carbohydrases facilitates the release of protein from brewer’s spent grain. Bioresource Technology (in press) A href="" target=_blank customattributes="popupwidth|0attribute_separationpopupheight|0">PMID: 23567727

- Poidevin L, Feliu J, Doan A, Berrin JG, Bey M, Coutinho PM, Henrissat B, Record E, Heiss-Blanquet S. (2013) Exploring family 6 glycoside hydrolases from Podospora anserina : insights into exo- and endo-glucanase activities. Applied and Environmental Microbiology. A href="" target=_blank>PMID: 23645193

- Poidevin L, Record E, Berrin JG, Coutinho PM, Henrissat B, Blanquet S (2013) Method for producing alcohol from lignocellulosic biomass by complementation of the cellulolytic and hemicellulolytic enzymes of Trichoderma reesei by the fungus Podospora anserina. WO Patent 2,013,088,003. A href="" target=_blank customattributes="popupwidth|0attribute_separationpopupheight|0">access

- Salvachua, D., Prieto, A., Mattinen, M-L., Tamminen, T., Liitia, T., Lille, M., Willför, S., Martinez, A.T., Martinez, M.J., Faulds, C.B. (2013) Versatile peroxidase as a valuable tool for generating new biomolecules by homogeneous and heterogeneous cross-linking. Enzyme Microb Technol (in press)

- Weiss S, Samson F, Navarro D, Casaregola S. (2013) YeastIP: a database for identification and phylogeny of Saccharomycotina yeasts. FEMS Yeast Res.13(1):117-25.A href="" target=_blank>PMID:23110448

2012A name=#2012>

- Arfi Y., Buée M., Marchand C., Levasseur A., Record E. (2012). Multiple markers pyrosequencing reveals fungal biodiversity and host specificity in mangroves. FEMSMicrobiology Ecology79, 433-44. A href="" target=_blank>PMID:22092266

- Arfi Y., Marchand C., Wartel M., Record E. (2012). Fungal diversity in anoxic-sulfidic sediments in a mangrove soil. Fungal Ecology 5, 282-285. A href="" target=_blank customattributes="popupwidth|0attribute_separationpopupheight|0">

- Berrin JG, Navarro D., Couturier M., Olivé C., Grisel S., Haon M., Taussac S., Lechat C, Courtecuisse R, Coutinho PM, Favel A., Lesage-Meessen L. (2012). Exploring natural fungal biodiversity from tropical and temperate forests to improve biomass conversion. Applied and Environmental Microbiology, 78, 6483-6490. A href="" target=_blank>PMID:22773628

- Camarero S., Pardo I., Cañas A.I., Molina P., Record E., Martinez AT. Martinez M.J., Alcalde M. (2012). Engineering platforms for the directed evolution of laccase from Pycnoporus cinnabarinus. Applied and Environmental Microbiology 78, 1370-84. A href="" target=_blank>PMID:22210206

- Cervera-Tison M., Tailford L., Fuell C., Bruel L., Sulzenbacher G., Henrissat B., Berrin JG., Fons M., Giardina T., Juge N. (2012) Functional analysis of family GH36 alpha-galactosidases from Ruminococcus gnavus E1: Insights into the metabolism of a plant oligosaccharide by a human gut symbiont. Applied and Environmental Microbiology 78(21):7720-32. A href="" target=_blank>PMID:22923411

- Chen S, Xu J, Liu C, Zhu Y, Nelson DR, Zhou S, Li C, Wang L, Guo X, Sun Y, Luo H, Li Y, Song J, Henrissat B, Levasseur A, Qian J, Li J, Luo X, Shi L, He L, Xiang L, Xu X, Niu Y, Li Q, Han MV, Yan H, Zhang J, Chen H, Lv A, Wang Z, Liu M, Schwartz DC, Sun C. 2012. Genome sequence of the model medicinal mushroom Ganoderma lucidum. Nature Communications. 3:913. PMID:22735441

- Couturier M., Navarro D., Olivé C., Chevret D, Haon M., Favel A., Lesage-Meessen L., Henrissat B, Coutinho PM, Berrin JG. (2012). Post-genomic analyses of fungal lignocellulosic biomass degradation reveal the unexpected potential of the plant pathogen Ustilago maydis. BMC Genomics 13, 57. A href="" target=_blank>PMID:22300648

- Lafond M., Navarro D., Haon M., Couturier M., Berrin JG. (2012). Characterization of a broad specificity beta-glucanase acting on beta-(1,3) / beta-(1,4) / beta-(1,6) glucans that defines a new glycoside hydrolase family. Applied and Environmental Microbiology 78(24):8540-6. A href="" target=_blank>PMID:23023747

- Levasseur A, Paganini J, Dainat J, Thompson JD, Poch O, Pontarotti P, Gouret P. (2012). The Chordate Proteome History Database. Evolutionary Bioinformatics. 8:437-447. PMID:22904610

- Lomascolo A., Uzan-Boukhris E., Sigoillot J.-C., Fine F. (2012) Rapeseed and sunflower meal: a review on biotechnology status and challenges. Applied Microbiology and Biotechnology95, 1105–1114. A href="" target=_blank>PMID: 22752367

- Navarro D., Favel A., Chabrol O, Pontarotti P, Haon M., Lesage-Meessen L. (2012). FunGene DB: A web-based tool for Polyporales strains authentication. J. Biotechnol. 161, 383-386. A href="" target=_blank>PMID:22766416

- Paës G, Berrin JG, Beaugrand J. (2012) GH11 xylanases: Structure/function/properties relationships and applications. Biotechnol Advances 30(3):564-92. A href="" target=_blank>PMID:22067746

- Ravalason H., Bertaud F.,Herpël-Gimbert I., Meyer V., Ruel K., Joseleau JP., Grisel S., Olivé C., Sigoillot JC., Petit-Conil M. (2012).Laccase/HBT and laccase-CBM/HBT treatment of softwood kraft pulp: Impact on pulp bleachability and physical properties. Bioresour Technol. 121, 68-75. A href="" target=_blank>PMID:22854132

- Ravalason H., Grisel S., Chevret D., Favel A., Berrin JG., Sigoillot JC., Herpël-Gimbert I. (2012).Fusarium verticillioides secretome as a source of auxiliary enzymes to enhance saccharification of wheat straw. Bioresour Technol. 114, 589-596. A href="" target=_blank>PMID:22459963

- Silva GG., Couturier M., Berrin JG., Buléon A., Rouau X. (2012). Effects of grinding processes on enzymatic degradation of wheat straw. Bioresour Technol. 103, 192-200. A href="" target=_blank>PMID:22029959

-Simoes FP, Navarro D, Lesage Meessen L, Santos C, Lima N. (2012) High throughput screening of hydrolytic enzymes of Aspergillus section Nigri strains. Associação Portuguesa Microbiologia (in press)

- Sigoillot JC, Berrin JG, Bey M, Lesage-Meessen L, Levasseur A, Lomascolo A, Record E, Uzan-Boukhris E (2012) Fungal Strategies for Lignin Degradation. In Lapierre C., Jouanin L. (Eds) LIGNINS: BIOSYNTHESIS, BIODEGRADATION AND BIOENGINEERING in: Advances in Botanical Research, 61:263-308. Elsevier, Amsterdam. A href="" target=_blank customattributes="popupwidth|0attribute_separationpopupheight|0">access

- Turbe-Doan A., Arfi Y., Record E., Estrada-Alvarado I., Levasseur A. (2012). Heterologous production of cellobiose dehydrogenases 1 from the basidiomycete Coprinopsis cinerea and the ascomycete Podospora anserina and their effect on saccharification of wheat straw. Applied Microbiology and Biotechnologyin press. A href="" target=_blank>PMID:22940800

- Welti S., Moreau PA., Favel A., Courtecuisse R, Haon M., Navarro D., Taussac S., Lesage-Meessen L. (2012). Molecular phylogeny of Trametes and related genra, and description of a new genus Leiotrametes. Fungal Diversity 55, 47-64.

2011A name=2011>

- Bey M, Berrin JG, Poidevin L, Sigoillot JC. (2011) Heterologous expression of Pycnoporus cinnabarinus cellobiose dehydrogenase in Pichia pastoris and involvment in saccharification processes. Microb Cell Fact. 10:113. A href="" target=_blank>PMID:22204630

- Couturier M., Haon M., Coutinho PM, Henrissat B, Lesage-Meessen L., Berrin JG. (2011). Podospora anserina hemicellulases potentiate the Trichoderma reesei secretome for saccharification of lignocellulosic biomass. Appl Environ Microbiol. 77(1), 237-46. A href="" target=_blank>PMID:21037302

- Couturier M., Féliu J., Haon M., Navarro D., Lesage-Meessen L., Coutinho PM, Berrin JG. (2011). A thermostable GH45 endoglucanase from yeast: impact of its atypical multimodularity on activity. Microb Cell Fact. 10, 103. A href="" target=_blank>PMID:22145993

- Diguistini S, Wang Y, Liao NY, Taylor G, Tanguay P, Feau N, Henrissat B, Chan SK, Hesse-Orce U, Alamouti SM, Tsui CK, Docking RT, Levasseur A, Haridas S, Robertson G, Birol I, Holt RA, Marra MA, Hamelin RC, Hirst M, Jones SJ, Bohlmann J, Breuil C. (2011). Genome and transcriptome analyses of the mountain pine beetle-fungal symbiont Grosmannia clavigera, a lodgepole pine pathogen. Proc Natl Acad Sci U S A (PNAS). 108:2504-9. PMID:21262841

- Faure E, Delaye L, Tribolo S, Levasseur A, Seligmann H, Barthélémy RM. 2011. Probable presence of an ubiquitous cryptic mitochondrial gene on the antisense strand of the cytochrome oxidase I gene. Biology Direct. 6:56. PMID:22024028

- Lesage-Meessen L., Haon M., Uzan E., Levasseur A., Piumi F., Navarro D., Taussac S., Favel A., Lomascolo A. (2011). Phylogenetic relationships in the polypore fungus Pycnoporus inferred from molecular data. FEMS Microbiology Letters325, 37-48. A href="" target=_blank>PMID:22092860

- Levasseur A, Pontarotti P. 2011. The role of duplications in the evolution of genomes highlights the need for evolutionary-based approaches in comparative genomics. Biology Direct. 6:11. PMID:21333002

- Lomascolo A., Uzan-Boukhris E., Herpoël-Gimbert I., Sigoillot J.C., Lesage-Meessen L. (2011). Mini-Review. Peculiarities of Pycnoporus species for applications in biotechnology. Applied Microbiology and Biotechnology92, 1129-1149. A href="" target=_blank>PMID:22038244

- Punt PJ, Levasseur A, Visser H, Wery J, Record E. (2011). Fungal protein production: Design and production of chimeric protein. Annual Review of Microbiology. 65:57-69 PMID:21639784

- Uzan E., Portet B., Lubrano C., Milesi S., Favel A., Lesage-Meessen L., Lomascolo A. (2011).Pycnoporus laccase-mediated bioconversion of rutin to oligomers suitable for biotechnology applications. Applied Microbiology and Biotechnology90, 97-105. A href="" target=_blank>PMID:21210103

2010A name=2010>

- Lecourt M., Meyer V., Sigoillot J.-C., Petit-Conil M. (2010). Cellulase-assisted refining of softwood kraft pulp to reduce energy consumption. Holzforschung 64, 441-447.

- Lecourt M., Sigoillot J.-C., Petit-Conil M. (2010). Cellulase-assisted refining of chemical pulps: Impact of enzymatic charge and refining intensity on energy consumption and pulp quality. Process Biochemistry 45, 1274-1278.

- Levasseur A., Saloheimo M., Navarro D., Andberg M., Pontarotti P., Kruus K., Record E. (2010). Exploring laccase-like multicopper oxidase genes from the ascomycete Trichoderma reesei : a functional, phylogenetic and evolutionary study. BMCBiochemistry 11, 32. PMID:20735824

- Navarro D., Couturier M., Ghizzi Damasceno da Silva G., Berrin J.-G., Rouau X., Asther M., Bignon C. (2010). An automated assay for screening the enzymatic release of reducing sugars from micronized biomass. Microbial Cell Factories 9, 58. A href="" target=_blank>PMID:20637080

- Ohm R.A., de Jong J.F., Lugones L.G., Aerts A., Kothe E., Stajich J., de Vries R.P., Record E., Levasseur A., Baker S.E., Bartholomew K.A., Coutinho P.M., Erdmann S., Fowler T.J., Gathman A.C., Lombard V., Henrissat B., Knabe N., Kües U., Lilly W.W., Lindquist E., Lucas S., Magnuson J.K., Piumi F., Raudaskoski M., Salamov A., Schmutz J., Schwarze1 F.W.M.R., vanKuyk P.A., Horton J.S., Grigoriev I.V., Wösten H.A.B. (2010). Genomic sequence of the wood-rotting Schizophyllum commune strain H4-8: the model organism to study mushroom formation. Nature Biotechnology 28, 957-63. PMID:20622885

- Pham T.A., Berrin J.-G., Record E., To K.A., Sigoillot J.-C. (2010). Hydrolysis of softwood by Aspergillus mannanase: role of a carbohydrate-binding module. Journal of Biotechnology 148, 163-170. A href="" target=_blank>PMID:20541570

- Te Biesebeke R.,, Levasseur A., Boussier A., Record E., Punt P.J., van den Hondel C.A.M.J.J. (2010). Phylogeny of fungal hemoglobins and expression analysis of the Aspergillus oryzae flavohemoglobin gene fhbA during hyphal growth. Mycological Research114, 135-43. PMID:20960969

- Uzan E., Nousiainen P., Balland V., Sipila J., Piumi F., Navarro D., Asther M., Record E., Lomascolo A. (2010) High-redox potential laccases from the ligninolytic fungi Pycnoporus coccineus and P. sanguineus suitable for white biotechnology: from gene cloning to enzyme characterization and applications. Journal of Applied Microbiology 108, 2199-2213. A href="" target=_blank>PMID:19968731

- Valls C., Colom J.F., Baffert C., Gimbert I., Roncero M.B., Sigoillot J.-C. (2010). Comparing the efficiency of the laccase–NHA and laccase–HBT systems in eucalyptus pulp bleaching. Biochemical Engineering Journal 49, 401-407.

2009A name=2009>

- Alberto F., Navarro D., de Vries R.P., Asther M., Record E. (2009). Technical advance in fungal biotechnology: development of a miniaturized culture method and an automated high-throughput screening. Letters in Applied Microbiology 49, 278-282.

- Do B.C., Thu D.T., Berrin J-G, To K.A., Haltrich D., Sigoillot J-C, Yamabhai M. (2009). Cloning, expression in Pichia pastoris, and characterization of a thermostable GH5 mannanase from Aspergillus niger BK01. Microbial Cell Factory 8:59. A href="" target=_blank>PMID:19912637

- Herpoël-Gimbert I., Margeot A., Dolla A., Jan G., Mollé D., Lignon S., Mathis H., Sigoillot J-C., Monot F. and Asther M. (2009). Comparative secretome analyses of two Trichoderma reesei RUT-C30 and CL847 hypersecretory strains. Biotechnology for Biofuels 1, 1-18.

- Levasseur A., Rascol VL., Chabrol O., Grusea S., Gouret P., Danchin EG, Pontarotti P. (2009) CASSIOPE: an expert system for conserved regions searches. BMC Bioinformatics 10, 284.

- Poidevin L., Levasseur A., Paes G., Navarro D., Asther M., Record E. (2009). Heterologous production of the Piromyces equi cinnamoyl esterase in Trichoderma reesei for biotechnological applications. Letters in Applied Microbiology 49, 673-678.

- Ravalason H., Herpoël-Gimbert I., Record E., Bertaud F., Grisel S., Campanacci V., Asther M., Petit-Conil M., Sigoillot J.-C. (2009). Fusion of a family 1 carbohydrate binding module to the Pycnoporus cinnabarinus laccase for efficient softwood kraft pulp biobleaching. Journal of Biotechnology 142, 220-6. A href="" target=_blank>PMID:19414054

- Tison, M., André-Leroux, G., Lafond, M., Georis, J., Juge, N., Berrin, J-G. (2009). Molecular determinants of substrate and inhibitor specificities of the Penicillium griseofulvum family 11 xylanases. Biochimica Biophysica Acta 1794, 438-445. A href="" target=_blank>PMID:19118652

- Verbeke J., Coutinho P., Mathis H., Quenot A., Record E., Asther M., Heiss-Blanquet S. (2009). Transcriptional profiling of cellulase and expansin-related genes in the hypercellulolytic Trichoderma reesei CL847 strain. Biotechnology Letters 31, 1399-1405.

2008A name=2008>

- André-Leroux, G., Berrin, J-G., Georis, J., Arnaut, F., Juge, N. (2008). Structure-based mutagenesis of Penicillium griseofulvum xylanase using computational design. Proteins 72, 1298-1307. A href="" target=_blank>PMID:18384043

- Berrin, J-G., Juge, N. (2008). Factors contributing to xylanase functionality in the degradation of cereal arabinoxylan. Biotechnology Letters 30, 1139-1150. A href="" target=_blank>PMID: 18320143

- Camarero S., Cañas A. I., Nousiainen P., Record E., Lomascolo A., Martínez M.J., Martínez A.T. (2008). p-Hydroxycinnamic acids as natural mediators for laccase oxidation of recalcitrant compounds. Environmental Science and Technology 42, 6703-9. A href="" target=_blank>PMID:18800552

- De-Wilde C., Uzan E., Zhou Z., Kruus K., Andberg M., Buchert J., Record E., Asther M., Lomascolo A. (2008). Transgenic rice as a novel production system for Melanocarpus and Pycnoporus laccases. Transgenic Research 17, 515-527. A href="" target=_blank>PMID:17687629

- Levasseur A., Piumi F., Coutinho P-M., Rancurel C., Asther Mi., Delattre M., Henrissat B., Pontarotti P., Asther M., Record E. (2008). FOLy : an integrated database for the classification and functional annotation of fungal oxidoreductases potentially involved in the degradation of lignin and related aromatic compounds. Fungal Genetic Biology 45, 638-645.

- Levasseur A, Pontarotti P, Poch O, Thompson JD. (2008) Strategies for reliable phylogenetic inference in high throughput biology. Evolutionary Bioinformatics 4, 121-137. PMID:19204813

- Levasseur A, Dufourny L, Migaud M, Callebaut I, Pontarotti P, Malpaux B, Philippe Monget. 2008. GPR50 is the mammalian ortholog of Mel1c-Evidence of a particularly fast evolution in mammals. BMC Evolutionary Biology. 8:105 PMID:18400093

- Marmuse L., Asther Mi., Fabre E., Navarro D., Lesage-Meessen L., Asther M., O’Donohue M., Fort S., Driguez H. (2008). New substrates for feruloyl esterases. Organic and Biomolecular Chemistry 6, 1208-1214.

- Molina S., Rencoret J., del Río J.C., Lomascolo A., Record E., Martínez A.T., Gutiérrez A. (2008). Oxidative modification of lipid model compounds representative for main paper pulp lipophilic extractives by the laccase-mediator system. Applied Microbiology and Biotechnology 80, 211-22. A href="" target=_blank>PMID:18563406

- Ravalason H., Jan G., Mollé D., Pasco M., Coutinho P.-M., Lapierre C., Pollet B., Bertaud F., Petit-Conil M., Grisel S., Sigoillot J.-C., Asther M., Herpoël-Gimbert I. (2008). Secretome analysis of Phanerochaete chrysosporium strain CIRM-BRFM 41 grown on softwood. Applied Microbiology and Biotechnology 80, 719-733. A href="" target=_blank>PMID:18654772

- Te Biesebeke R., Record E. (2008). Scientific advances with Aspergillus species that are used for food and biotech applications. Microbes and Environment 23, 177-181.

2007A name=2007>

- Benoit I., Coutard B., Oubelaid R., Asther Mi., Asther M., Bignon C. (2007). Expression in Escherichia coli, refolding and crystallization of Aspergillus niger feruloyl esterase A using a serial factorial approach. Protein Expression and Purification 55, 166-174.

- Benoit I., Asther Mi., Bourne Y., Navarro D., Canaan S., Lesage-Meessen L., Herweijer M., Coutinho P.-M., Asther M., Record E. (2007). Gene overexpression and biochemical characterization of the biotechnologically relevant chlorogenic acid hydrolase from Aspergillus niger. Applied Environmental Microbiology 73, 5624-5632.

- Berrin, J-G., Ajandouz, el H., Georis, J., Arnaut, P., Juge N. (2007). Substrate and product hydrolysis specificity in family 11 glycoside hydrolases : an analysis of Penicillium funiculosum and Penicillium griseofulvum xylanases. Applied Microbiology and Biotechnology 74, 1001-1010.

- Giraud F., Dupont J., Haon M., Bouzid O., Alibeu O., Navarro D., Sage L., Seigle-Murandi F., Asther M., Lesage-Meessen L. (2007). Phylogenetic analysis of the Aspergillus niger aggregate in relation to feruloyl esterase activity. Research in Microbiology 158, 413-419.

- Levasseur A, Orlando L, Bailly X, Milinkovitch MC, Danchin EGJ, Pontarotti P. (2007). Conceptual bases for quantifying the role of the environment on gene evolution: the participation of positive selection and neutral evolution. Biological Reviews 82, 1-22.

- Marmuse L., Asther Mi., Navarro D., Lesage-Meessen L., Asther M., Fort S. and Driguez H. (2007). Chromogenic substrates for feruloyl esterases. Carbohydrate Research 342, 2316-2321.

- Meza J.C., Auria R., Lomascolo A., Sigoillot J.-C. and Casalot L. (2007). Role of ethanol on growth, laccase production and protease activity in Pycnoporus cinnabarinus ss3 grown on sugarcane bagasse. Enzyme Microbial Technolology 41, 162-163.

- Selinheimo E., Nieidhin D., Steffensen C., Nielsen J., Lomascolo A., Halaouli S., Record E., O'beirne D., Buchert J., Kruus K. (2007). Comparison of the characteristics of fungal and plant tyrosinases. Journal of Biotechnolology 130, 471-80. A href="" target=_blank>PMID:17602775

2006A name=2006>

- Benoit I., Asther Mi., Sulzenbacher G., Record E., Marmuse L., Parsigla G, Gimbert I., Asther M., Bignon C. (2006). Respective role of protein folding and glycosylation in the thermal stability of recombinant feruloyl esterase A. FEBS Letters 580, 5816-5821.

- Benoit I., Navarro D., Marnet N., Rakotomanomana N., Lesage-Meessen L., Sigoillot J.-C., Asther M. and Asther Mi. (2006). Feruloyl esterase as a tool for the release of phenolic compounds from agro-industrial by-products. Carbohydrate Research341, 1820-1827.

- Bouzid O., Record E., Asther Mi., Haon M., Navarro D., Asther M. and Lesage-Meessen L. (2006). Exploration of members of Aspergillus sections Nigri, Flavi and Terrei for feruloyl esterase production, Canadian Journal of Microbiology 52, 886-892.

- Danchin E, Levasseur A, Lopez Rascol V, Gouret P , Pontarotti P. The use of evolutionary biology concepts for genome annotation. (2006). JEZ Part B: Molecular and Developmental Evolution. 308B: 26-36

- Halaouli S., Asther M., Sigoillot J.-C., Hamdi M. and Lomascolo A. (2006). Fungal Tyrosinase: new prospects in molecular characteristics, bioengineering and biotechnological applications. Journal of Applied Microbiology100, 219-232.A href="" target=_blank> PMID:16430498

- Halaouli S., Record E., Casalot L., Hamdi M., Sigoillot J.-C., Asther M. and Lomascolo A. (2006). Cloning and characterization of a tyrosinase from the white-rot fungus, Pycnoporus cinnabarinus, and overproduction in Aspergillus niger. Applied Microbiology and Biotechnology 70, 580-589. A href="" target=_blank>PMID:16151802

- Levasseur A., Gouret P., Lesage-Meessen L., Asther Michèle, Asther M., Record E., Pontarotti P. (2006) Tracking the evolutionary and functional shifts connection : the lipase-esterase example. BMC Evolutionary Biology 6, 92-98.

- Levasseur A., Saloheimo M., Navarro D., Andberg M., Monot F., Nakari-Setala T., Asther M., Record E. (2006). Production of a chimeric enzyme tool associating the Trichoderma reesei swollenin with the Aspergillus niger feruloyl esterase A for release of ferulic acid, Applied Microbiology and Biotechnology 73, 872-880.

- Meza JC., Lomascolo A., Navarro D., Sigoillot JC. and Auria R. (2006) New process for fungal delignification of sugar-cane bagasse and simultaneous production of laccase in a Vapor Phase Bioreactor. Journal of Agricultural Food and Chemistry54, 3852-3858. A href="" target=_blank>PMID:16719506

- Tabka M.G., Herpoël-Gimbert I., Monod F., Asther M. and Sigoillot J.-C. (2006). Enzymatic saccharification of wheat straw for bioethanol production by a combined cellulase xylanase and feruloyl esterase treatment. Enzyme and Microbial Technology39, 897-902.

- Tapin S., Sigoillot J-C., Asther M., Petit-Conil (2006). Feruloyl esterase utilization for silmutaneous processing of nonwood plants into phenolic compounds and pulp papers. Journal of Agricultural and food chemistry 54, 3697-3703.

2005A name=2005>

- Asther Mi., Estrada Alvarado M. I., Haon M., Navarro D., Asther M., Lesage-Meessen L. and Record E. (2005). Purification and characterization of a chlorogenic acid hydrolase from Aspergillus niger catalysing the hydrolysis of chlorogenic acid. Journal of Biotechnology115, 47-56.

- Bouzid O., Navarro D., Roche M., Asther Mi., Haon M., Delattre M., Lorquin J., Labat M., Asther M. and Lesage-Meessen L. (2005). Fungal enzymes as a powerful tool to release simple phenolic compounds from olive oil by-product. Process Biochemistry40, 1855-1862.

- Halaouli S., Asther Mi., Kruus K., Guo L., Hamdi M., Sigoillot J.-C., Asther M. and Lomascolo A. (2005). Characterization of a new tyrosinase from Pycnoporus species with high potential for food technological applications. Journal of Applied Microbiology98, 332-343. A href="" target=_blank>PMID:15659188

- Kachouri S., Halaouli S.,Lomascolo A., Asther M. & Hamdi M. (2005) Decolourization of black oxidized olive-mill wasterwater by a new tannase-producing Aspergillus flavus strain isolated from soil. World J. Microbiol. Biotechnol.21, 1465-1470. DOI: 10.1007/s11274-005-6810-8

- Levasseur A., Asther M. and Record E. (2005). Overproduction and characterization of xylanase B from Aspergillus niger, Canadian Journal of Microbiology51, 177-

- Levasseur A., Navarro D., Punt P.-J., Belaich J.-P., Asther M. and Record E. (2005). Improvement of ferulic release by action of engineered bifunctional enzymes associating the feruloyl esterase A, the xylanase B and a carbohydrate-binding module from Aspergillus niger. Applied and Environmental Microbiology,71, 8132-8140.

- Madzak C., Otterbein L., Chamkha M., Moukha S., Asther M., Gaillardin C. and Beckerich. (2005). Heterologous production of a laccase from the basidiomycete Pycnoporus cinnabarinus in the dimorphic yeast Yarrowia lipolytica. FEMS Yeast Research5, 635-646.

- Meza JC., Lomascolo A., Casalot L., Sigoillot JC. and Auria R. (2005) Laccase production by Pycnoporus cinnabarinus grown on sugar-cane bagasse: Influence of ethanol vapors as inducer. Process Biochemistry. 40, 3365-3371.

- Sigoillot C., Camarero S., Vidal T., Record E., Asther Michèle, Pérez-Boada M., Martinez M., Sigoillot J.-C., Asther M., Colom J. and Martinez A. (2005). Comparison of different fungal enzymes for bleaching high-quality paper pulps. Journal of Biotechnology115, 333-343.

- Te Bieseke R., RecordE., Van Biezen N., Heerikkhuisen M., FrankenA., Van Den HondelC A.M.J.J., Punt P.J. (2005). Branching mutants of Aspergillus oryzae with improved amylase and protease production on solid-substrates. Applied Microbiology and Biotechnology, 69, 44-55.