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INRAE

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Last update: May 2021

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Institut Sophia Agrobiotech

UMR INRA - Univ. Nice Sophia Antipolis - Cnrs

http://www.paca.inra.fr/institut-sophia-agrobiotech_eng/

Publications

M2P2 publications on HAL

2021

  • Burte, V., G. Perez, F. Ayed, G. Groussier, L. Mailleret, L. van Oudenhove, et V. Calcagno. « Up and to the Light: Intra- and Interspecific Variability of Photo- and Geo-Tactic Oviposition Preferences in Genus Trichogramma ». BioRxiv, recommended by PCI Zoology. https://doi.org/10.1101/2021.03.30.437671.
  • Clin, Pauline, Frederic Grognard, Ludovic Mailleret, Florence Val, Didier Andrivon, et Frédéric Hamelin. « Taking advantage of pathogen diversity and immune priming to minimize disease prevalence in host mixtures: a model ». Phytopathology, (2021). https://doi.org/10.1094/PHYTO-09-20-0429-R.
  • Demory, David, Joshua S. Weitz, Anne-Claire Baudoux, Suzanne Touzeau, Natalie Simon, Sophie Rabouille, Antoine Sciandra, et Olivier Bernard. « A Thermal Trade-off between Viral Production and Degradation Drives Virus-Phytoplankton Population Dynamics ». Ecology Letters 24, no 6 (2021): 1133‑44. https://doi.org/10.1111/ele.13722.
  • Dahirel, Maxime, Aline Bertin, Vincent Calcagno, Camille Duraj, Simon Fellous, Géraldine Groussier, Eric Lombaert, Ludovic Mailleret, Anaël Marchand, et Elodie Vercken. « Landscape Connectivity Alters the Evolution of Density-Dependent Dispersal during Pushed Range Expansions », 2021, recommended by PCI Evolutionary Biology. https://doi.org/10.1101/2021.03.03.433752.
  • Djuikem, Clotilde, Frédéric Grognard, Roger Tagne Wafo, Suzanne Touzeau, et Samuel Bowong. « Modelling Coffee Leaf Rust Dynamics to Control Its Spread ». Mathematical Modelling of Natural Phenomena, 2021. https://doi.org/10.1051/mmnp/2021018.
  • Etienne, Lucas, Cécile Bresch, Louise Van Oudenhove, et Ludovic Mailleret. « Food and Habitat Supplementation Promotes Predatory Mites and Enhances Pest Control ». Biological Control, 2021, 104604. https://doi.org/10.1016/j.biocontrol.2021.104604.
  • Tankam-Chedjou, Israël, Frédéric Grognard, Jean Jules Tewa, et Suzanne Touzeau. « Optimal and Sustainable Management of a Soilborne Banana Pest ». Applied Mathematics and Computation 397 (15 mai 2021): 125883. https://doi.org/10.1016/j.amc.2020.125883.
  • Touzeau, Suzanne, Jean-Jules Tewa, Frédéric Grognard, et Israël Tankam Chedjou. « When and How to Fallow: First Steps towards Banana Crop Yield Improvement through Optimal and Sustainable Control of a Soilborne Pest ». Journal of Interdisciplinary Methodologies and Issues in Sciences Digital Agriculture in Africa (2021). https://doi.org/10.18713/JIMIS-120221-8-4.
  • Vercken, Elodie, Géraldine Groussier, Laurent Lamy, et Ludovic Mailleret. « The hidden side of the Allee effect: correlated demographic traits and extinction risk in experimental populations », 2021. Recommended by PCI Ecology. https://hal.archives-ouvertes.fr/hal-02570868.

2020

  • Aubree, Flora, Patrice David, Philippe Jarne, Michel Loreau, Nicolas Mouquet, et Vincent Calcagno. « How Community Adaptation Affects Biodiversity–Ecosystem Functioning Relationships ». Ecology Letters 23, no 8 (2020): 1263‑75. https://doi.org/10.1111/ele.13530.
  • Bout, Alexandre, Nicolas Ris, Cécilia Multeau, et Ludovic Mailleret. « Lutte biologique par augmentation à l’aide d’arthropodes entomophages contre les arthropodes phytophages ». In Biocontrôle. Éléments pour une protection agroécologique des cultures., 376 p. Editions Quae, 2020. https://hal.inrae.fr/hal-03145545.
  • Cakpo, Coffi Belmys, Gilles Vercambre, Valentina Baldazzi, Léa Roch, Zhanwu Dai, Pierre Valsesia, Mohamed-Mahmoud Memah, et al. « Model-Assisted Comparison of Sugar Accumulation Patterns in Ten Fleshy Fruits Highlights Differences between Herbaceous and Woody Species ». Annals of Botany 126-3 (2020): 455‑70. https://doi.org/10.1093/aob/mcaa082.
  • Calcagno, Vincent, Frédéric Hamelin, Ludovic Mailleret, et Frédéric Grognard. « How Optimal Foragers Should Respond to Habitat Changes: On the Consequences of Habitat Conversion ». Theoretical Ecology 13, no 2 (juin 2020): 165‑75. https://doi.org/10.1007/s12080-019-00437-7.
  • Dahirel, Maxime, Aline Bertin, Marjorie Haond, Aurélie Blin, Eric Lombaert, Vincent Calcagno, Simon Fellous, Ludovic Mailleret, Thibaut Malausa, et Elodie Vercken. « Shifts from Pulled to Pushed Range Expansions Caused by Reduction of Landscape Connectivity ». Oikos, 2020, 708‑24. https://doi.org/10.1101/2020.05.13.092775.
  • Ezanno, P., M. Andraud, G. Beaunée, T. Hoch, S. Krebs, A. Rault, S. Touzeau, E. Vergu, et S. Widgren. « How Mechanistic Modelling Supports Decision Making for the Control of Enzootic Infectious Diseases ». Epidemics 32 (2020): 100398. https://doi.org/10.1016/j.epidem.2020.100398.
  • Kanso, Hussein, Bénédicte Quilot-Turion, Mohamed-Mahmoud Memah, Olivier Bernard, Jean-Luc Gouzé, et Valentina Baldazzi. « Reducing a Model of Sugar Metabolism in Peach to Catch Different Patterns among Genotypes ». Mathematical Biosciences 321 (2020): 108321. https://doi.org/10.1016/j.mbs.2020.108321.
  • Lartigue Silène, Yalaoui Myriam, Belliard Jean, Caravel Claire, Jeandroz Louise, Groussier Géraldine, Calcagno Vincent, et al. « Consistent Variations in Personality Traits and Their Potential for Genetic Improvement of Biocontrol Agents: Trichogramma Evanescens as a Case Study ». 2020. Recommended by PCI Ecology. https://doi.org/10.1101/2020.08.21.257881.
  • Nilusmas, Samuel, Mathilde Mercat, Thomas Perrot, Caroline Djian‐Caporalino, Philippe Castagnone‐Sereno, Suzanne Touzeau, Vincent Calcagno, et Ludovic Mailleret. « Multi-Seasonal Modelling of Plant-Nematode Interactions Reveals Efficient Plant Resistance Deployment Strategies ». Evolutionary Applications 13, no 9 (2020): 2206‑21. https://doi.org/10.1111/eva.12989.
  • Tankam-Chedjou, Israël, Suzanne Touzeau, Ludovic Mailleret, Jean Jules Tewa, et Frédéric Grognard. « Modelling and Control of a Banana Soilborne Pest in a Multi-Seasonal Framework ». Mathematical Biosciences 322 (2020): 108324. https://doi.org/10.1016/j.mbs.2020.108324.
  • Yegorov, Ivan, Frédéric Grognard, Ludovic Mailleret, Fabien Halkett, et Pierre Bernhard. « A Dynamic Game Approach to Uninvadable Strategies for Biotrophic Pathogens ». Dynamic Games and Applications 10-1 (2020): 257‑96.

2019

  • Bajeux, Nicolas, Frédéric Grognard, et Ludovic Mailleret. « Influence of the Components of Propagule Pressure, Allee Effects, and Stochasticity on the Time to Establish Introduced Populations ». Journal of Theoretical Biology 471 (2019): 91‑107. https://doi.org/10.1016/j.jtbi.2019.03.012.
  • Baldazzi, Valentina, Valsesia Pierre, Génard Michel, et Bertin Nadia. « Organ-Wide and Ploidy-Dependent Regulation Both Contribute to Cell-Size Determination: Evidence from a Computational Model of Tomato Fruit ». Journal of Experimental Botany 70-21 (2019): 6215‑28. https://doi.org/10.1093/jxb/erz398.
  • Bresch, C., L. Carlesso, R. Suay, L. Van Oudenhove, S. Touzeau, H. Fatnassi, L. Ottenwaelder, et al. « In Search of Artificial Domatia for Predatory Mites ». Biocontrol Science and Technology 29-2 (2019): 131‑48. https://doi.org/10.1080/09583157.2018.1540030.
  • Koch, Garance, Gaëlle Rolland, Myriam Dauzat, Alexis Bédiée, Valentina Baldazzi, Nadia Bertin, Yann Guédon, et Christine Granier. « Leaf Production and Expansion: A Generalized Response to Drought Stresses from Cells to Whole Leaf Biomass—A Case Study in the Tomato Compound Leaf ». Plants 8-10 (2019): 409. https://doi.org/10.3390/plants8100409.
  • Morel‐Journel, T., Assa, C.R., Mailleret, L., and Vercken, E. (2019). Its all about connections: hubs and invasion in habitat networks. Ecology Letters 22, 313–321. DOI: 10.1111/ele.13192.
  • Rousseau, Elsa, Mélanie Bonneault, Frédéric Fabre, Benoît Moury, Ludovic Mailleret, et Frédéric Grognard. « Virus Epidemics, Plant-Controlled Population Bottlenecks and the Durability of Plant Resistance ». Philosophical Transactions of the Royal Society B: Biological Sciences 374-1775 (2019): 20180263. https://doi.org/10.1098/rstb.2018.0263.

2018

  • Bresch, C., Carlesso, L., Suay, R., Oudenhove, L.V., Touzeau, S., Fatnassi, H., Ottenwaelder, L., Paris, B., Poncet, C., Mailleret, L., et al. (2018). In search of artificial domatia for predatory mites. Biocontrol Science and Technology 0, 1–18. DOI: 10.1080/09583157.2018.1540030
  • Casagranda, S., Touzeau, S., Ropers, D., and Gouzé, J.-L. (2018). Principal process analysis of biological models. BMC Systems Biology 12, 68. DOI: 10.1186/s12918-018-0586-6
  • Desnoues, E.; Génard, M.; Quilot-Turion, B. & Baldazzi, V. A kinetic model of sugar metabolism in peach fruit reveals a functional hypothesis of markedly low fructose-to-glucose ratio phenotype. The Plant Journal, 2018 DOI: 10.1111/tpj.13890.
  • Go, N., Belloc, C., Bidot, C., and Touzeau, S. Why, when and how should exposure be considered at the within-host scale? A modelling contribution to PRRSv infection. Math Med Biol. DOI: 10.1093/imammb/dqy005
  • Go, N., Touzeau, S., Islam, Z., Belloc, C., and Doeschl-Wilson, A. (2019). How to prevent viremia rebound? Evidence from a PRRSv data-supported model of immune response. BMC Systems Biology 13, 15. DOI: 10.1186/s12918-018-0666-7
  • Hoch, T., Touzeau, S., Viet, A.-F., and Ezanno, P. (2018). Between-group pathogen transmission: From processes to modeling. Ecological Modelling 383, 138–149. DOI: 10.1016/j.ecolmodel.2018.05.016
  • Koch, G., Rolland, G., Dauzat, M., Bédiée, A., Baldazzi, V., Bertin, N., Guédon, Y., and Granier, C. Are compound leaves more complex than simple ones? A multi-scale analysis. Ann Bot. DOI: 10.1093/aob/mcy116
  • Morel Journel, T.; Hautier, M.; Vercken, E. & Mailleret, L. (2018). Clustered or scattered? The impact of habitat quality clustering on establishment and early spread of an introduced population. Ecography. DOI: 10.1111/ecog.03397.
  • Rousseau, E., Tamisier, L., Fabre, F., Simon, V., Szadkowski, M., Bouchez, O., Zanchetta, C., Girardot, G., Mailleret, L., Grognard, F., et al. Impact of genetic drift, selection and accumulation level on virus adaptation to its host plants. Molecular Plant Pathology 0. DOI: 10.1111/mpp.12730

2017

  • Bertin, N., Fatnassi, H., Vercambre, G. and Poncet, C. (2017). Simulation of tomato production under photovoltaic greenhouses. Acta Hortic. 1170, 425-432. DOI: 10.17660/ActaHortic.2017.1170.52
  • Calcagno, V., Mitoyen, C., Audiot, P., Ponsard, S., Gao, G.-Z., Lu, Z.-Z., Wang, Z.-Y., He, K.-L., and Bourguet, D. Parallel evolution of behaviour during independent host-shifts following maize introduction into Asia and Europe. Evol Appl. DOI: 10.1111/eva.12481
  • Calcagno, V., Jarne, P., Loreau, M., Mouquet, N., and David, P. (2017). Diversity spurs diversification in ecological communities. Nature Communications 8, ncomms15810. DOI: 10.1038/ncomms15810
  • Desnoues, E., Génard, M., Baldazzi, V., and Quilot-Turion, B. (2017). A kinetic model of sugar metabolism allows the simulation of sugar concentrations and their genetic variability during peach fruit growth. Acta Horticulturae 361–366. DOI: 10.17660/ActaHortic.2017.1160.52
  • Desnoues, E., Génard, M., Quilot-Turion, B., and Baldazzi, V. (2017). A kinetic model of sugar metabolism in peach fruit allows the exploration of genetic variability. Acta Horticulturae 169–176. DOI: 10.17660/ActaHortic.2017.1182.20
  • Nilusmas, S., Mercat, M., Perrot, T., Touzeau, S., Calcagno, V., Djian Caporalino, C., Castagnone-Sereno, P., and Mailleret, L. (2017). A multi-seasonal model of plant-nematode interactions and its use to identify durable plant resistance deployment strategies. Acta Horticulturae 211–218. DOI: 10.17660/ActaHortic.2017.1182.25
  • Ravigné, V., Lemesle, V., Walter, A., Mailleret, L., and Hamelin, F.M. (2017). Mate Limitation in Fungal Plant Parasites Can Lead to Cyclic Epidemics in Perennial Host Populations. Bull Math Biol 79, 430–447. DOI: 10.1007/s11538-016-0240-7
  • Rousseau, E., Moury, B., Mailleret, L., Senoussi, R., Palloix, A., Simon, V., Valière, S., Grognard, F., and Fabre, F. (2017). Estimating virus effective population size and selection without neutral markers. PLOS Pathogens 13, e1006702.  DOI: 10.1371/journal.ppat.1006702
  • Tamisier, L., Rousseau, E., Barraillé, S., Nemouchi, G., Szadkowski, M., Mailleret, L., Grognard, F., Fabre, F., Moury, B., and Palloix, A. (2017). Quantitative trait loci in pepper control the effective population size of two RNA viruses at inoculation. Journal of General Virology. DOI: 10.1099/jgv.0.000835
  • Teixeira Alves, M., Grognard, F., Calcagno, V., and Mailleret, L. (2016). Shared predation: positive effects of predator distraction. bioRxiv. DOI: 10.1101/063230
  • van Oudenhove, L., Mailleret, L., and Fauvergue, X. (2017). Infochemical use and dietary specialization in parasitoids: a meta-analysis. Ecol Evol. DOI: 10.1002/ece3.2888

2016

  • Bajeux, N., Grognard, F., and Mailleret, L. (2016). Augmentative biocontrol when natural enemies are subject to Allee effects. J. Math. Biol. 1–27.
  • Gauthier, G., Péron, G., Lebreton, J.-D., Grenier, P., and Oudenhove, L. van (2016). Partitioning prediction uncertainty in climate-dependent population models. Proc. R. Soc. B 283, 20162353.
  • Hamelin, F.M., Bisson, A., Desprez-Loustau, M.-L., Fabre, F., and Mailleret, L. (2016). Temporal niche differentiation of parasites sharing the same plant host: oak powdery mildew as a case study. Ecosphere 7. DOI: 10.1002/ecs2.1517
  • Morel-Journel, T., Piponiot, C., Vercken, E., and Mailleret, L. (2016). Evidence for an optimal level of connectivity for establishment and colonization. Biology Letters 12, 20160704. DOI: 10.1098/rsbl.2016.0704
  • Morel-Journel, T., Girod, P., Mailleret, L., Auguste, A., Blin, A., and Vercken, E. (2016). The highs and lows of dispersal: how connectivity and initial population size jointly shape establishment dynamics in discrete landscapes. Oikos. DOI: 10.1111/oik.02718
  • Savall, J.F., Bidot, C., Leblanc-Maridor, M., Belloc, C., and Touzeau, S. Modelling Salmonella transmission among pigs from farm to slaughterhouse: Interplay between management variability and epidemiological uncertainty. International Journal of Food Microbiology. DOI: 10.1016/j.ijfoodmicro.2016.03.020

2015

  • Fabre, F., Rousseau, E., Mailleret, L., and Moury, B. (2015). Epidemiological and evolutionary management of plant resistance: optimizing the deployment of cultivar mixtures in time and space in agricultural landscapes. Evol Appl. DOI: 10.1111/eva.12304
  • Facon, B., Mailleret, L., Renault, D., and Roques, L. (2015). Biological invasion processes: evaluation and prediction. Revue d'Ecologie 70, 110-113. http://hdl.handle.net/2042/57889
  • Ghosh, B., Grognard, F., and Mailleret, L. (2015). Natural enemies deployment in patchy environments for augmentative biological control. Applied Mathematics and Computation 266, 982–999. DOI: 10.1016/j.amc.2015.06.021
  • Henriques-Silva, R., Boivin, F., Calcagno, V., Urban, M.C., and Peres-Neto, P.R. (2015). On the evolution of dispersal via heterogeneity in spatial connectivity. Proceedings of the Royal Society of London B: Biological Sciences 282, 20142879. DOI: 10.1098/rspb.2014.2879
  • Hubert, N., Calcagno, V., Etienne, R.S., and Mouquet, N. (2015). Metacommunity speciation models and their implications for diversification theory. Ecol Lett. DOI: 10.1111/ele.12458
  • Morel-Journel, T., Girod, P., Mailleret, L., Auguste, A., Blin, A., and Vercken, E. (2015). The highs and lows of dispersal: how connectivity and initial population size jointly shape establishment dynamics in discrete landscapes. Oikos. DOI: 10.1111/oik.02718
  • Morel-Journel, Thibaut; Fauvergue, Xavier; Lombaert, Eric; Mailleret, Ludovic; Malausa, Thibaut; Ris, Nicolas; Vercken, Elodie (2015). De l’utilisation de microcosmes pour le test d’hypothèses en biologie de l’invasion. Revue d'Ecologie 70, 16–27. http://hdl.handle.net/2042/57879
  • Parolin, P., Bresch, C., Poncet, C., Suay-Cortez, R., and Oudenhove, L.V. (2015). Testing basil as banker plant in IPM greenhouse tomato crops. International Journal of Pest Management 61, 235–242. DOI: 10.1080/09670874.2015.1042414
  • Parolin Pia, Bresch Cécile , and Poncet Christine (2015). Biocontrol plants and functional diversity in biological control of the red spider mite Tetranychus urticae : A review. International Journal of Agricultural Policy and Research 3, 198–212. DOI: dx.doi.org/10.15739/IJAPR.041i
  • Parolin, P., Bresch, C., Oudenhove, L. van, Errard, A., and Poncet, C. (2015). Distribution of pest and predatory mites on plants with differing availability of acarodomatia. International Journal of Agricultural Policy and Research 3, 267–278.
  • Vercken, E., Fauvergue, X., Ris, N., Crochard, D., and Mailleret, L. (2015). Temporal autocorrelation in host density increases establishment success of parasitoids in an experimental system. Ecol Evol. DOI: 10.1002/ece3.1505

Archive 2011-2006

2011-2006 publication list
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